PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR75800.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family WOX
Protein Properties Length: 248aa    MW: 27505.9 Da    PI: 5.8837
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR75800.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox52.77e-172484257
                T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox  2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                r+R+t+++eq+ ++e+ F+    +ps++e  ++ k+l    ++ +++V++WFqNrR + ++
  RWR75800.1 24 RSRWTPKPEQIMIMESIFNTgLVNPSKDETVRIRKQLekfgSVADANVFYWFQNRRSRSRR 84
                89*****************99*************************************997 PP
2Wus_type_Homeobox105.53.3e-342386265
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       +r+RWtP+peQi+i+e+++++Gl++P+k+e+ ri+++Le++G + d+NVfyWFQNr++R+r++q
         RWR75800.1 23 VRSRWTPKPEQIMIMESIFNTGLVNPSKDETVRIRKQLEKFGSVADANVFYWFQNRRSRSRRRQ 86
                       589***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MEEDHVHESS NDPSQELERP EPVRSRWTPK PEQIMIMESI FNTGLVNPSK DETVRIRKQL  60
EKFGSVADAN VFYWFQNRRS RSRRRQRQIK ALMANNPQIL SGVSATGAIP YEHTPPLSVG  120
SFASSSSSSP WVMAPSSCEA FDNNGGNNHF SVSQQMGSLE MEQMPMVSSI ILPSNNANLH  180
YQSGLITVFI NGVPSEVPRG PLDMKAMFGQ DVMLVHSSGE PVPVNEIGIS LQSLQPGEHY  240
FLVTGANY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03660.12e-59WOX family protein