PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR75828.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NAC
Protein Properties Length: 198aa    MW: 23214 Da    PI: 7.2151
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR75828.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM122.44.1e-3891372128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
                 p G+rF P+d+ l+++yLk+kv + +l++ ++ik+v ++y+++P+dL++  k++++ekewyfF++r  ky++g+ +nra + gyWk tg++++++  kg
  RWR75828.1   9 PSGYRFCPRDHHLINDYLKNKVMNLPLPC-DIIKDVvNLYDHNPQDLKEkfKISNDEKEWYFFTSRYDKYENGDPSNRASRCGYWKGTGTQQPITY-KG 105
                 89***************************.8899988**********84357888999**************************************.99 PP

         NAM  98 elvglkktLvfykgrapkgekt.dWvmheyrl 128
                 +++g k++Lvfy+++ p+g kt +W+++ey l
  RWR75828.1 106 NVIGYKTSLVFYENQPPQGIKThHWIIDEYML 137
                 9*******************9945******87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MAHDGAQFPS GYRFCPRDHH LINDYLKNKV MNLPLPCDII KDVVNLYDHN PQDLKEKFKI  60
SNDEKEWYFF TSRYDKYENG DPSNRASRCG YWKGTGTQQP ITYKGNVIGY KTSLVFYENQ  120
PPQGIKTHHW IIDEYMLDKI TSPGGVIEGR KRQKTNVADD NNKLDDDWVL CRIYESNNTQ  180
HYNDSNCNRM TLIAQLHI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.14e-40NAC family protein