PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR76116.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

GRAS

Protein Properties

Length: 156aa MW: 18362.1 Da PI: 6.9106

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR76116.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	189.7	1.9e-58	2	151	225	374
GRAS 225 devLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaG 323 d++L +++l Pkv+vv+eqe++hn+++++er+leal++y+alfd+l+++++r+s +rikvE++l g+ei+n++aceg er+erhe+le+W +rle+aG RWR76116.1 2 DNFLASLWGLLPKVMVVTEQESNHNGSTLMERLLEALYFYAALFDCLDSTVSRASMDRIKVEKMLYGEEIKNIIACEGGERKERHEKLERWIHRLEMAG 100 78*********************************************************************************************** PP GRAS 324 FkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 ++ +ls + +qa++ll+ ++++gy+++ee+gs++++W+dr+L++vSaWr RWR76116.1 101 YERSQLSCYGLMQARRLLQSYGFEGYKIKEENGSFIICWHDRALFAVSAWR 151 ************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 156 aa Download sequence
MDNFLASLWG LLPKVMVVTE QESNHNGSTL MERLLEALYF YAALFDCLDS TVSRASMDRI 60 KVEKMLYGEE IKNIIACEGG ERKERHEKLE RWIHRLEMAG YERSQLSCYG LMQARRLLQS 120 YGFEGYKIKE ENGSFIICWH DRALFAVSAW RCRRYD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G50420.1	7e-69	GRAS family protein