PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR76118.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family GRAS
Protein Properties Length: 471aa    MW: 53142.1 Da    PI: 6.1082
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR76118.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS454.85.3e-139464661374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lLl+cA++vssg+le+a+ +L+++s laspdgd+mqR+aayf+eAL  r+++s+++ly+al++++ s  + ++ +  ++lf+e++P+lk+s+++ N
  RWR76118.1  46 LIQLLLTCANHVSSGSLENANLCLEQISLLASPDGDSMQRMAAYFAEALGGRILKSWPGLYRALNSTRMS--SLADGILLRRLFFELCPFLKLSFVISN 142
                 689*************************************************************999988..59************************* PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 qaI ea+ege++vHiiD+++ +++QW+aLlq L++Rpegpp+lRiTg+++    +ke le+t+ rL++ Ae+l++pf+fn+ ++++le+l++e+Lrvk+
  RWR76118.1 143 QAIIEAMEGEKMVHIIDLNAAEPAQWIALLQMLNARPEGPPHLRITGIHE----HKEVLEQTALRLTEEAEKLDIPFQFNP-IVSKLENLDPESLRVKT 236
                 **************************************************....9**************************.7999************* PP

        GRAS 199 gEalaVnlvlqlhrll......................................................desvsleserdevLklvkslsPkvvvvve 243
                 gEala+++vlqlh+ll                                                      ++s + + + d++L  +++l Pkv+vv+e
  RWR76118.1 237 GEALAISSVLQLHSLLapdddvvkktppaakypssahlqrvlqmkqstlrellekdlmingynhnqspdsASSPPCSARMDNFLASLWGLLPKVMVVTE 335
                 *****************************************************************99998777777779******************** PP

        GRAS 244 qeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllr 342
                 qe++hn+++++er+leal++y+alfd+l+++++r+s +rikvE++l g+ei+n++aceg er+erhe+le+W +rle+aG++  +ls +  +qa++ll+
  RWR76118.1 336 QESNHNGSTLMERLLEALYFYAALFDCLDSTVSRASMDRIKVEKMLYGEEIKNIIACEGGERKERHEKLERWIHRLEMAGYERSQLSCYGLMQARRLLQ 434
                 *************************************************************************************************** PP

        GRAS 343 kvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  ++++gy+++ee+gs++++W+dr+L++vSaWr
  RWR76118.1 435 SYGFEGYKIKEENGSFIICWHDRALFAVSAWR 466
                 *******************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 471 aa     Download sequence    
MVQDDGSSSV TSSPLQFFSL MSISPGLGSP YQWLRELKSE ERGLCLIQLL LTCANHVSSG  60
SLENANLCLE QISLLASPDG DSMQRMAAYF AEALGGRILK SWPGLYRALN STRMSSLADG  120
ILLRRLFFEL CPFLKLSFVI SNQAIIEAME GEKMVHIIDL NAAEPAQWIA LLQMLNARPE  180
GPPHLRITGI HEHKEVLEQT ALRLTEEAEK LDIPFQFNPI VSKLENLDPE SLRVKTGEAL  240
AISSVLQLHS LLAPDDDVVK KTPPAAKYPS SAHLQRVLQM KQSTLRELLE KDLMINGYNH  300
NQSPDSASSP PCSARMDNFL ASLWGLLPKV MVVTEQESNH NGSTLMERLL EALYFYAALF  360
DCLDSTVSRA SMDRIKVEKM LYGEEIKNII ACEGGERKER HEKLERWIHR LEMAGYERSQ  420
LSCYGLMQAR RLLQSYGFEG YKIKEENGSF IICWHDRALF AVSAWRCRRY D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein