PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR76161.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 479aa MW: 54999.9 Da PI: 9.0389

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR76161.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.5	7.3e-14	25	69	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT++Ed +l + ++ +G+++W+++a+ + +t qc+ rw++yl RWR76161.1 25 TWTPQEDNILREHIRIHGTERWTSVAAQFK-DKTSRQCRRRWYTYL 69 6**************************9.***********97 PP
2	Myb_DNA-binding	46.7	7.3e-15	75	118	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g WT++Ed++l +a k +G++ W+ Ia+ + gRt++ +k+r+ + RWR76161.1 75 KGCWTEQEDKILCEAQKIYGNR-WTEIAKVVS-GRTDNAVKNRFST 118 799*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence
MHAMKPPQDA RKFEGWKQSD RRIVTWTPQE DNILREHIRI HGTERWTSVA AQFKDKTSRQ 60 CRRRWYTYLN SECKKGCWTE QEDKILCEAQ KIYGNRWTEI AKVVSGRTDN AVKNRFSTLC 120 KKQAKLQATT KENSNEHINL NNKRVIIQDR HTAAGTSGSM TPLKEMRMHI SDFTRNCNMK 180 ERWFQESANA KQMQLRSPLA VLVQNSNVGN GPTQQHLINH CRVAVDDEKT DLKVQGMFLR 240 KNDSKVTALM QQAKFFSLLT REVNMENTSQ SIENAWKVLH NFLARYEESK QLRCKILEME 300 FLLKNFKDLV EDQNSSTTES RQSLRQLDLH DESQGSSEYS TGSTQHWHPT DNKIVEHQSE 360 GCLINHSPSI KRETENRQVQ INGGSKEGCS ATASIDKAAI MPSSDEPRDG DGAICKRSNT 420 EFSSPLQMVP FFQHFEEGIP SPRFTDSERH FLLKTLGLAS PSVNANTNPS CRRALLHSL

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence

MHAMKPPQDA RKFEGWKQSD RRIVTWTPQE DNILREHIRI HGTERWTSVA AQFKDKTSRQ  60
CRRRWYTYLN SECKKGCWTE QEDKILCEAQ KIYGNRWTEI AKVVSGRTDN AVKNRFSTLC  120
KKQAKLQATT KENSNEHINL NNKRVIIQDR HTAAGTSGSM TPLKEMRMHI SDFTRNCNMK  180
ERWFQESANA KQMQLRSPLA VLVQNSNVGN GPTQQHLINH CRVAVDDEKT DLKVQGMFLR  240
KNDSKVTALM QQAKFFSLLT REVNMENTSQ SIENAWKVLH NFLARYEESK QLRCKILEME  300
FLLKNFKDLV EDQNSSTTES RQSLRQLDLH DESQGSSEYS TGSTQHWHPT DNKIVEHQSE  360
GCLINHSPSI KRETENRQVQ INGGSKEGCS ATASIDKAAI MPSSDEPRDG DGAICKRSNT  420
EFSSPLQMVP FFQHFEEGIP SPRFTDSERH FLLKTLGLAS PSVNANTNPS CRRALLHSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02820.2	1e-123	MYB family protein