PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR76226.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB_related
Protein Properties Length: 189aa    MW: 21055.1 Da    PI: 10.5862
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR76226.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.36.2e-12555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT+eE+  l+ +v ++G g W+tI +          R+  ++k++w++
       RWR76226.1  5 KQKWTAEEESALKAGVVKHGAGKWRTILKDPEfssvlYLRSNVDLKDKWRN 55
                     79***********************************88***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MGAPKQKWTA EEESALKAGV VKHGAGKWRT ILKDPEFSSV LYLRSNVDLK DKWRNMSVTA  60
NGFGSREKAR LALKRSQPTP KHDDNPVALN TVVENFDEEI VDAKPLAISN GAMQISSSKR  120
SISRLDNLIV EAITNLKEPT GSNKTAIAMY IEVKRSKKRE INEGKDGRES QRRAMVGPKQ  180
AVSDFKKTF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.14e-64MYB_related family protein