PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR76345.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NAC
Protein Properties Length: 171aa    MW: 20080.9 Da    PI: 9.4096
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR76345.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM121.48e-38141392128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                 p G+rF Pt++el+++  +kk+++ +l++ + ikev++yk++P++L +++ + +e+++yfF+++ +ky++g +++r+tk+gyWka+  ++e+++ ++++
  RWR76345.1  14 PCGYRFCPTNKELLKYLQRKKIDNLPLPC-DLIKEVELYKCDPSELLAQFGSrGEEKCYFFTSTYRKYRNGIQPSRSTKNGYWKASTGETEIKE-RNNV 110
                 89************555566799999999.99**************865555256689***************************9999****9.8899 PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                 +g+ ++Lvfy g++p+ +kt+W+mheyrl
  RWR76345.1 111 IGTMRSLVFYYGEHPREKKTNWIMHEYRL 139
                 ***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MSCGATTSTS MRIPCGYRFC PTNKELLKYL QRKKIDNLPL PCDLIKEVEL YKCDPSELLA  60
QFGSRGEEKC YFFTSTYRKY RNGIQPSRST KNGYWKASTG ETEIKERNNV IGTMRSLVFY  120
YGEHPREKKT NWIMHEYRLS EHQSVNHAQF PTDPMKVYKH YTISSLYNNS L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.16e-37NAC family protein