PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR76368.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB_related
Protein Properties Length: 166aa    MW: 19028.5 Da    PI: 4.6975
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR76368.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.13.5e-0790132444
                      S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 
                      W+ eE +l+  a +    g   +W+ +a+++g g+t++++ +++
       RWR76368.1  90 WSWEENKLFELALAIVDEGnpdRWNMVASMVG-GKTAEEVAEHF 132
                      ***************999999***********.********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MSREAARVGF PQKRGLKREL MGNKVPEFPH RFGGLVASLE QGKWRRRRDG VAGKTESEHW  60
VILEDLLSEG ELRNWVVGTM EEIRGVCSGW SWEENKLFEL ALAIVDEGNP DRWNMVASMV  120
GGKTAEEVAE HFWILVEDLQ CIESGELDHR IEEEQLHPRV GMMETD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.23e-20MYB_related family protein