PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR76532.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NF-YB
Protein Properties Length: 177aa    MW: 19765.1 Da    PI: 7.932
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR76532.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB1702.8e-5330125297
       NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 
                 +eqd++lPianv+rimk++lP nakisk+aket+qecvsefisfvt+easdkc+rekrkt+ngdd++wal tlGf+dy+eplk yl+kyr+l+ge+
  RWR76532.1  30 NEQDHLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCRREKRKTVNGDDICWALRTLGFDDYAEPLKRYLQKYRDLDGER 125
                 79******************************************************************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MVDSSPDSES HKYKAGGGAI SNTSGDGCMN EQDHLLPIAN VGRIMKQILP PNAKISKEAK  60
ETMQECVSEF ISFVTGEASD KCRREKRKTV NGDDICWALR TLGFDDYAEP LKRYLQKYRD  120
LDGERANSGG LNRGSNSVVK EEPTAIFRSE QERKQPSNPS LMKFNVIDRN NSSSRPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.11e-57NF-YB family protein