PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR76653.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

bHLH

Protein Properties

Length: 183aa MW: 20190.5 Da PI: 8.2302

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR76653.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	34.1	4.8e-11	2	49	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h ++Er+RR+++N+ + Lr+l P + k+ + a+i ++e+Ik+L RWR76653.1 2 SHIAVERNRRKQMNEHLKVLRSLTPCF---YLKRGDQASIIAGVIEFIKEL 49 89**********************9...89***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 183 aa Download sequence
MSHIAVERNR RKQMNEHLKV LRSLTPCFYL KRGDQASIIA GVIEFIKELH QVLQSLESKK 60 QRKSLSPGPG PGPSPRPLHA TPSPDGPFGF ENVKELGACC NSPIADVEAK ISGSNVILKT 120 ISRRIPGQIV KIITILENLS LEILHLNISS MDDTVLCSFV IKIGLECQLS LEELALEVQQ 180 SFN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06120.1	2e-82	bHLH family protein