PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR76686.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 228aa    MW: 25448.8 Da    PI: 10.1325
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR76686.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.56.4e-102672251
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYI 51
                r+ h+ +Er RR+ +++ f +L  llP+a   +  + + ++iL + v+YI
  RWR76686.1 26 RERHKLAERERRKSMRELFLNLHALLPHA---STVRKEQSAILDEIVKYI 72
                899**************************...9999*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MTMEWPSEWD SARPGDSKSA SETDARERHK LAERERRKSM RELFLNLHAL LPHASTVRKE  60
QSAILDEIVK YIPLAVARLR SLQSRRDLPA QKQRHASEGA AAVHVSVPNS DSSNSGDCDI  120
RVAPEPTSSV SIRVRGDRVN VSLTDTKATS QAVLLSAVLD ELDTHQLELV RSTHCRDGAK  180
LLHHSESKVR DGLDRSPALL KERLQDLACK LHKLRKSSSL KRTFGQIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.14e-07bHLH family protein