PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR76687.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 260aa    MW: 28850.6 Da    PI: 8.2436
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR76687.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.27.9e-102672251
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYI 51
                r+ h+ +Er RR+ +++ f +L  llP+a   +  + + ++iL + v+YI
  RWR76687.1 26 RERHKLAERERRKSMRELFLNLHALLPHA---STVRKEQSAILDEIVKYI 72
                899**************************...9999*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MTMEWPSEWD SARLGDSKSA SETDARERHK LAERERRKSM RELFLNLHAL LPHASTVRKE  60
QSAILDEIVK YIPLAVARLR SLQSRRDLPA QKQRHASEGA PAVHVSVPNS DSSNSGDCYI  120
RVAPEPTSSV SIRVRGDRVN VSLTDTKATS QAVLLSAVLD ELGMHQLELV RSTHCRDGAK  180
LLHHSESKVR PSISLSLSPS VTCDIREYPE WCSSFSGPGK RWIGSITGFA KGEIAGSCLQ  240
TAQATEIFFP QENIWPNQLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.13e-07bHLH family protein