PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR76720.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB_related

Protein Properties

Length: 720aa MW: 80166.9 Da PI: 7.8534

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR76720.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.6	2.4e-07	615	664	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ RWR76720.1 615 RRPFSVSEVEALVQAVERLGTGRWRDVKLRAFenaKHRTYVDLKDKWKTL 664 678999******************9888888************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 720 aa Download sequence
MVFQKKLDYG FNGYQVPAVP RGSRSVRRRR LFKKNGDDSQ MCAFDLNGDE SRMCAFDLLA 60 TLAGELLLEK ERSPASCNVS SGRTEFAIRK DSIKQEQQDE EHSFKQEPCD QGSCDESASV 120 FMLGSHSQSH DPSSMDYSHA KEDSTPRLAS VIVKSEKPKN TSYAEELVVD EDGKEYENYP 180 HTIHETRHVE GSSPGSAESH DGKVEDEIER QLEVEQRSTK SLKHGTVSDI IHWDDPMEMD 240 TKPPALASSD SSAELPMYGS AQNPCSSFSR CRDDVKVVSK DDDENSSGCT QRSTSTLKSF 300 RLPCLGDRRI RKLMASKYRK SASTITKDGE LSNSELDMKP VFRSRKICYT RQRSQRCSFK 360 RRKLFERSKI SISDGGTNTK VVSDSFEKGI SGEETGLGAT MHQGSRVSSP VIGHKSSMQS 420 RDSHVKLRIK SFKVPELFIE IPETATVGSL KRTVMDAVTA VFGGGLRVGV LLHGKKIRDD 480 NITLLQTGIS CDDKVENLGF TLEPATVHPP LSQSSEDPRC LLPCDSSQPV TRNPLVPASD 540 PGVSEAFPDS PVTNSGNSIE SNHDSVSFPA DTSPEKSTPD SKALVAIPAT SLEALAMVPL 600 HRKSKRSEVV QRRIRRPFSV SEVEALVQAV ERLGTGRWRD VKLRAFENAK HRTYVDLKDK 660 WKTLVHTARI SPQQRRGEPV PQELLDRVLA AHAYWSQHQN KHHNNKLMLQ QQSEPPCLVH

Sequence ? help Back to Top

Protein Sequence Length: 720 aa Download sequence

MVFQKKLDYG FNGYQVPAVP RGSRSVRRRR LFKKNGDDSQ MCAFDLNGDE SRMCAFDLLA  60
TLAGELLLEK ERSPASCNVS SGRTEFAIRK DSIKQEQQDE EHSFKQEPCD QGSCDESASV  120
FMLGSHSQSH DPSSMDYSHA KEDSTPRLAS VIVKSEKPKN TSYAEELVVD EDGKEYENYP  180
HTIHETRHVE GSSPGSAESH DGKVEDEIER QLEVEQRSTK SLKHGTVSDI IHWDDPMEMD  240
TKPPALASSD SSAELPMYGS AQNPCSSFSR CRDDVKVVSK DDDENSSGCT QRSTSTLKSF  300
RLPCLGDRRI RKLMASKYRK SASTITKDGE LSNSELDMKP VFRSRKICYT RQRSQRCSFK  360
RRKLFERSKI SISDGGTNTK VVSDSFEKGI SGEETGLGAT MHQGSRVSSP VIGHKSSMQS  420
RDSHVKLRIK SFKVPELFIE IPETATVGSL KRTVMDAVTA VFGGGLRVGV LLHGKKIRDD  480
NITLLQTGIS CDDKVENLGF TLEPATVHPP LSQSSEDPRC LLPCDSSQPV TRNPLVPASD  540
PGVSEAFPDS PVTNSGNSIE SNHDSVSFPA DTSPEKSTPD SKALVAIPAT SLEALAMVPL  600
HRKSKRSEVV QRRIRRPFSV SEVEALVQAV ERLGTGRWRD VKLRAFENAK HRTYVDLKDK  660
WKTLVHTARI SPQQRRGEPV PQELLDRVLA AHAYWSQHQN KHHNNKLMLQ QQSEPPCLVH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	307	313	DRRIRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	1e-108	MYB_related family protein