PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR76772.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WOX

Protein Properties

Length: 229aa MW: 25664.8 Da PI: 7.9236

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR76772.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.5	7.1e-21	23	82	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++tkeq+ +Le l+++ r+psae++++++++l +++ ++V++WFqN++a++++ RWR76772.1 23 SRWNPTKEQIGVLEGLYKQgIRTPSAEQIQQITSRLraygHIEGKNVFYWFQNHKARQRQ 82 8***************99************************************97 PP
2	Wus_type_Homeobox	116.1	1.7e-37	21	84	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++RW+Pt+eQi +Le lyk+G+rtP++e+iq+it++L++yG+ie+kNVfyWFQN+kaR+rqkq RWR76772.1 21 SSSRWNPTKEQIGVLEGLYKQGIRTPSAEQIQQITSRLRAYGHIEGKNVFYWFQNHKARQRQKQ 84 689***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 229 aa Download sequence
MEEEKSIDMP ISSNGGSGTP SSSRWNPTKE QIGVLEGLYK QGIRTPSAEQ IQQITSRLRA 60 YGHIEGKNVF YWFQNHKARQ RQKQKQESMV YFNRFLHKST PILAPPCTNV VCGAYCIPHP 120 PVGFYPQYPK VLLPGARRRP IEEKVAGKTK ENLCEGYESA HPVNDSMDAE GTMTHETLQL 180 FPLHPTGILK SRSEDPSPST STQTCNTEEG SVEGTSINFW SNHESQAKI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59340.1	7e-49	WOX family protein