PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR76816.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 235aa MW: 27145.6 Da PI: 8.8426

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR76816.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.8	1.8e-16	8	55	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed++l ++v +G ++W+ Ia+ g++Rt+k+c++rw +yl RWR76816.1 8 KGPWTEQEDLQLMHVVGHFGERRWDFIAKVSGLNRTGKSCRLRWVNYL 55 79********************************************97 PP
2	Myb_DNA-binding	53.7	4.9e-17	61	105	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r r+T++E+ l ++++ ++G++ W++Iar+++ gRt++++k++w+++ RWR76816.1 61 RERMTPQEEHLVIELHSKWGNR-WSRIARKLP-GRTDNEIKNYWRTH 105 789*****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MVQEETRKGP WTEQEDLQLM HVVGHFGERR WDFIAKVSGL NRTGKSCRLR WVNYLHPGLK 60 RERMTPQEEH LVIELHSKWG NRWSRIARKL PGRTDNEIKN YWRTHTRKKA QERKQAMSPP 120 SSASSYSFSP PSSNCQFPSP NIPAAKVVDA RQKVETGKFK MNCDKGSCAS LTTQGKEIQE 180 ESGIGYSMEQ IWKEIDSKSD QMASDAVDES CKEYGCSFFC PSLPSPVWDY RYDFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59780.3	2e-74	MYB family protein