PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR76824.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 253aa    MW: 28359.9 Da    PI: 9.2333
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR76824.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.20.000161491881155
                 HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 rR +++ +++  L++l+ +      +K + a++L++A+ +Ik Lq
  RWR76824.1 149 RRSNKLGERITALQQLVSPF-----GKTDTASVLQEATVHIKLLQ 188
                 78899999*********998.....8****************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MRKSGCDFAG NNQVQMQSSN ASTIELERLN GYSRGFFHDS QLSNDLQLGR FTPLSTVETS  60
QELDYIPGAD VLMTTNPTYL NISHTKFTSR VSPVEDCMEK SRKRTVSFDT INNQTPMKES  120
KKKSVCAQEQ YHLTSKESST IEQLRAPVRR SNKLGERITA LQQLVSPFGK TDTASVLQEA  180
TVHIKLLQDQ IQVLSTPYFR IRQPFHSQSG GEEKNDLRSR GLCLVPVSST ANLTKEDGGM  240
NRCGTGRQVT NRF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19500.13e-27bHLH family protein