PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR76887.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 238aa    MW: 26020.7 Da    PI: 9.3387
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR76887.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2651.5e-2051100255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+W+AeIrdp   + + +r++lg+f+tae+Aa a+++a+++++g
  RWR76887.1  51 HYRGVRQRP-WGKWAAEIRDP---N-KaARVWLGTFDTAEGAAMAYDRAALRFKG 100
                 7********.**********9...3.35***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MSAMVSALTH VIRASEAGAT APISGNPLPA PDSGSGEHPP SQEQVPSRRR HYRGVRQRPW  60
GKWAAEIRDP NKAARVWLGT FDTAEGAAMA YDRAALRFKG TKAKLNFPER VQGHTDMGFF  120
LSTPSASSNH ARPPSHELHL RPPPPPPQDP FPDLLQYAQL LRSGDEDFQF AASNLYSRDF  180
FASPPPDSSS TSSSSSSSSS FASQHDYMRF PSQFRSSSSS SDLPEQGKET GSNIKKEY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.14e-45ERF family protein