PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR76908.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NF-YB

Protein Properties

Length: 247aa MW: 27633.6 Da PI: 10.1564

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR76908.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	175.6	4.8e-55	98	191	1	94
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 vreqdrflPian+srimkk++Pan+ki+kd+ketvqecvsefisf+tseasdkcqrekrktingddllwa+atlGfe+y++plk+yl+k+re + RWR76908.1 98 VREQDRFLPIANISRIMKKAVPANGKIAKDSKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEEYIDPLKLYLQKFREGD 191 69*****************************************************************************************965 PP

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence
MAAKLLLLLR STAAAFHKAS SPIELLLRYS SLTIMIHQHI YSHSSNRPII SLSPSAPKIT 60 KHPLSFLLSI RVLEEWRRDR RARVEEAMSG EQSPRSNVRE QDRFLPIANI SRIMKKAVPA 120 NGKIAKDSKE TVQECVSEFI SFITSEASDK CQREKRKTIN GDDLLWAMAT LGFEEYIDPL 180 KLYLQKFREG DTKGPAKAGD GSGKKDAFGV QAGSSNQIAH QGSFTQDMNY IHSQSQGQHL 240 IVPNARN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37060.1	1e-75	NF-YB family protein