PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR77136.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family GRAS
Protein Properties Length: 591aa    MW: 64389.9 Da    PI: 5.0126
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR77136.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS466.11.9e-1422215871374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.ppsetseknsseelaalklfsevsPilkfshlta 98 
                 lv++L++cAeav++++l++ +al++++  la++++ +m+++a +f++AL++r++r    +y++  +p +  +++ s+ l  +  f+e++P+lkf+h+ta
  RWR77136.1 221 LVHALMACAEAVQQDNLKAGEALVKQIGLLAASQAGAMRKVANCFAQALEQRIYR----IYRISpSPDAFFDSTLSDLL--QMHFYETCPYLKFAHFTA 313
                 689****************************************************....88655233333333344443..345*************** PP

        GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                 NqaIlea++g++rvH+iDf+++qG+QWpaL+qaLa Rp+gpps+R+Tg+g+p+++++++l+++g++La++Ae+++v+fe++ +va++l+dle++ L+v+
  RWR77136.1 314 NQAILEAFSGKSRVHVIDFSMKQGMQWPALMQALALRPGGPPSFRLTGIGPPQPDNTDALQQVGWKLAQLAETIHVEFEYRGFVASSLADLEPQLLDVR 412
                 *************************************************************************************************** PP

        GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl.eaklpreseerikvErellgreiv 295
                 p+Ea+aVn+v++lh+ll++++++e     vL +vk ++P++v+vveqea+hn++ F++rf+eal+yys++fds+   ++ +  ++++++++++lgr+i 
  RWR77136.1 413 PNEAVAVNSVFELHKLLSRPGAMER----VLGTVKAVKPEIVTVVEQEANHNGPVFVDRFTEALHYYSSMFDSIeGCGMTPPGSQDQVMSEMYLGRQIL 507
                 *****************99999999....*********************************************767788888999************* PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 nvvacegaer+erhetl++Wr+r+++aGF+pv+l+++a kqa++ll+ ++ +dgyrvee++g+l+lgW++rpL+++SaWr
  RWR77136.1 508 NVVACEGAERVERHETLAQWRARMGAAGFGPVNLGSNAFKQASMLLALFAgGDGYRVEENNGCLMLGWHTRPLIATSAWR 587
                 *******************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 591 aa     Download sequence    
MKRDLQDSSS SSTGGYPIFG TGKKMMQEDS PPQQADAGMD ELLAALGYKV RASEMAEVAH  60
KLEQLEMVMG NQEDGLLSHL ATETVHYNPS DIATWLETML SEFNAPPQPP NFPHPQPLID  120
NNTAAAADSS TITTVDFPNR SRPPHQIYDS DSDLGAMIPN EIAFGGGAES DSTVVDGREK  180
KRIRTTTGAG AAPTAITSDD SGSELTRPVV LVDSQENGIR LVHALMACAE AVQQDNLKAG  240
EALVKQIGLL AASQAGAMRK VANCFAQALE QRIYRIYRIS PSPDAFFDST LSDLLQMHFY  300
ETCPYLKFAH FTANQAILEA FSGKSRVHVI DFSMKQGMQW PALMQALALR PGGPPSFRLT  360
GIGPPQPDNT DALQQVGWKL AQLAETIHVE FEYRGFVASS LADLEPQLLD VRPNEAVAVN  420
SVFELHKLLS RPGAMERVLG TVKAVKPEIV TVVEQEANHN GPVFVDRFTE ALHYYSSMFD  480
SIEGCGMTPP GSQDQVMSEM YLGRQILNVV ACEGAERVER HETLAQWRAR MGAAGFGPVN  540
LGSNAFKQAS MLLALFAGGD GYRVEENNGC LMLGWHTRPL IATSAWRIPK H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.10.0GRAS family protein