PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR77145.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WOX

Protein Properties

Length: 329aa MW: 37109.5 Da PI: 9.0338

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR77145.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	68.3	9.5e-22	88	147	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql++Le+l+++ +r+p+a+++++++++l +++ ++V++WFqN++a+e++ RWR77145.1 88 SRWNPTPEQLQTLEDLYRRgTRTPTADQIQHITAQLrrygKIEGKNVFYWFQNHKARERQ 147 7***************99************************************97 PP
2	Wus_type_Homeobox	116.1	1.6e-37	86	149	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++RW+PtpeQ++ Le+ly++G+rtP++++iq+ita+L++yGkie+kNVfyWFQN+kaRerqk+ RWR77145.1 86 VSSRWNPTPEQLQTLEDLYRRGTRTPTADQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQKR 149 579***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
MWMMGCSDGS SGLQTSDSFN GRKLRPLIPR PTLSTSTCTT TRSSSSSSCF NHRIHNNRNI 60 TTNLFALHNH LGTTEQGKRE ASNHPVSSRW NPTPEQLQTL EDLYRRGTRT PTADQIQHIT 120 AQLRRYGKIE GKNVFYWFQN HKARERQKRR RQIEAAMALE RDAESLERKD SAMCRTEGCK 180 SWTHPINYSI LAEESASLST KGEKAREGWL QCNRQLHHQS STEENATWHL MHFSSLPHLI 240 NTTPFATTIP PPTSTIATRA EVYEAAASNI PINGSLEIPN EYGQSQTLEL FPLRSNGIVE 300 KMPSLPVSPP ITTSSSMDSL GPSQFFHFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18010.1	2e-46	WOX family protein