PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR77188.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

YABBY

Protein Properties

Length: 140aa MW: 15858 Da PI: 8.9983

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR77188.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	63.8	7.1e-20	1	57	1	57
YABBY 1 advfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqll 57 ++++ +se+v yv+CnfCnt+lav vP + l+++vtv+CGhC++l ++++ +sq + RWR77188.1 1 MEHVPTSEHVYYVRCNFCNTVLAVGVPCKRLLETVTVKCGHCSNLSFLTIRAMSQSQ 57 57899****************************************999998887654 PP
2	YABBY	88.1	2.3e-27	77	138	98	159
YABBY 98 seklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaakn 159 ++ s+++++ +p+ p+v++PPek+ r Psaynrf+k+eiqrika nP+i hreafs+aakn RWR77188.1 77 GHSSSTSSQNVTPNSPNVVKPPEKKHRLPSAYNRFMKDEIQRIKAINPEIPHREAFSMAAKN 138 3444788899999999*********************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 140 aa Download sequence
MEHVPTSEHV YYVRCNFCNT VLAVGVPCKR LLETVTVKCG HCSNLSFLTI RAMSQSQYPD 60 LQLGFQSQGF SNDYKRGHSS STSSQNVTPN SPNVVKPPEK KHRLPSAYNR FMKDEIQRIK 120 AINPEIPHRE AFSMAAKNEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69180.1	1e-53	YABBY family protein