PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR77324.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ZF-HD
Protein Properties Length: 155aa    MW: 17187.1 Da    PI: 8.1418
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR77324.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer90.31.8e-28959457
  ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57
                  +Y+eCl+NhAaslG++a+DGCgEf+++   +++  +l+CaACgCHRnFHR+ v
   RWR77324.1  9 EVYRECLRNHAASLGSYATDGCGEFISD---DSSGGGLQCAACGCHRNFHRKVV 59
                 68*************************8...45679****************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MESDNKRSEV YRECLRNHAA SLGSYATDGC GEFISDDSSG GGLQCAACGC HRNFHRKVVV  60
GGGEGVMMMG FGGRSSAAES GKKRVRTKFS GEQKEKMLKF AEKIGWRIQR KDHEDDDGDD  120
EIERFCREVG VSRQVFKVWI HNHKNSSSSS SSLTQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.15e-35ZF-HD family protein