PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR77395.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

YABBY

Protein Properties

Length: 180aa MW: 20000.7 Da PI: 7.4351

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR77395.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	202.4	1.8e-62	6	157	4	170
YABBY 4 fssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssekls 102 + +seqvCy+ Cn+Cn ilavsvPs+slf +vtvrCGhCt+l svn+a a q l+ ++ ++ ++ + ++++ +++s +++++ ++s RWR77395.1 6 DAASEQVCYIPCNYCNIILAVSVPSSSLFDIVTVRCGHCTNLWSVNMAAALQSLSWQEI----------QTPGFISPDYRMDS-ASSSRCNKIAM-QVS 92 6789****************************************9999988887773..........44444444444332.22333333443.334 PP YABBY 103 enedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 ++e + v+rPPekrqrvPsayn+fikeeiqrika+nP+ishreafs+aaknWahfP+ihfgl RWR77395.1 93 ARNNEAL---AAVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHFPHIHFGL 157 4444444...469***************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 180 aa Download sequence
MSSCIDAASE QVCYIPCNYC NIILAVSVPS SSLFDIVTVR CGHCTNLWSV NMAAALQSLS 60 WQEIQTPGFI SPDYRMDSAS SSRCNKIAMQ VSARNNEALA AVNRPPEKRQ RVPSAYNQFI 120 KEEIQRIKAN NPEISHREAF STAAKNWAHF PHIHFGLMLE NNQAKLDEGS GEHLMTKAAI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26580.1	4e-83	YABBY family protein