PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR77557.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

E2F/DP

Protein Properties

Length: 404aa MW: 46237.5 Da PI: 9.6733

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR77557.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	42	1.5e-13	31	76	8	58
E2F_TDP 8 lltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnl 58 +++ +f+++++++ ++++l+e+a++L v +rRRiYDi+N+Le+l++ RWR77557.1 31 MICGSFINMYNTEGVKVIELDEAASQL---GV--ERRRIYDIVNILESLGV 76 57999*****999********.....**************975 PP
2	E2F_TDP	65.5	6.9e-21	168	252	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.........dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 r+eksL+lltq+flkl+ + + ++++l+e+a+ L s+ d +k+ R+YDi+NVL ++nliek ++k+ ++w g RWR77557.1 168 RREKSLGLLTQNFLKLFLTMNVNMISLDEAANFLFSDihgltqvknDSTEKVKRLYDIANVLASMNLIEKtyqtgSRKPVYKWLG 252 689*************************************9999666799**************9999999****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MSSSDGNRDH THSRMNKSLG LLFSASLKCL MICGSFINMY NTEGVKVIEL DEAASQLGVE 60 RRRIYDIVNI LESLGVRPIP SLCCRALELF IFFYLRVMSR KAKNQYSWKG FYAIPHALEQ 120 LKVLDNDENE VFLDRGGDER RTLKFNPNPD PEPLPFVSIS SRNNAENRRE KSLGLLTQNF 180 LKLFLTMNVN MISLDEAANF LFSDIHGLTQ VKNDSTEKVK RLYDIANVLA SMNLIEKTYQ 240 TGSRKPVYKW LGFKGRSVND AVFSSRPPDP QPPKKRNFGT DITNIDFVKK SKLNSSVDEK 300 PVKMQMNSDD STAQRHCTHL RKQKQQDPKD CSFGPFQLTG SHDTGRKGLK RNQEWKSLPS 360 SYHPEYLNQA LNDLFAHYVE AWKSWYAEVA RGNNQSRNTI HPPS

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MSSSDGNRDH THSRMNKSLG LLFSASLKCL MICGSFINMY NTEGVKVIEL DEAASQLGVE  60
RRRIYDIVNI LESLGVRPIP SLCCRALELF IFFYLRVMSR KAKNQYSWKG FYAIPHALEQ  120
LKVLDNDENE VFLDRGGDER RTLKFNPNPD PEPLPFVSIS SRNNAENRRE KSLGLLTQNF  180
LKLFLTMNVN MISLDEAANF LFSDIHGLTQ VKNDSTEKVK RLYDIANVLA SMNLIEKTYQ  240
TGSRKPVYKW LGFKGRSVND AVFSSRPPDP QPPKKRNFGT DITNIDFVKK SKLNSSVDEK  300
PVKMQMNSDD STAQRHCTHL RKQKQQDPKD CSFGPFQLTG SHDTGRKGLK RNQEWKSLPS  360
SYHPEYLNQA LNDLFAHYVE AWKSWYAEVA RGNNQSRNTI HPPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	2e-80	E2F/DP family protein