PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR77564.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 310aa    MW: 33724.4 Da    PI: 7.2565
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR77564.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH505.3e-16247293455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  hn  E+rRR+riN+++  L+ l+P++      K +Ka++L +A+eY+k+Lq
  RWR77564.1 247 VHNLSEKRRRSRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 293
                 6*************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MSAVAATGAA PLAFTSPPAP TSPAAATLGL TSSHLERTRN SSFSSSSSSV VSFFFFNMAE  60
TNDRPTRSHE ADADDMSLLL HHLLSSSSTP NPISPDKGKV PFHLPPPSQT SDAALAIAAR  120
RAVGLNPGWD IFCHVKTPFA DDDRSRPSQL HLSDRDRTTS TEESSAAPLF RPYSAGEMKD  180
GRRSNFVDSS DYCDAASGKR RKAASSSVEA DFDEYECESE EGVEASEDPS RAAPARSASK  240
RSRAAEVHNL SEKRRRSRIN EKMKALQNLI PNSNKTDKAS MLDEAIEYLK QLQLQVQSLE  300
KKKLTRILPP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.14e-27bHLH family protein