PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR77566.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

bHLH

Protein Properties

Length: 431aa MW: 47149.2 Da PI: 5.5738

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR77566.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.4	8.5e-16	247	293	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn E+rRR+riN+++ L+ l+P++ K +Ka++L +A+eY+k+Lq RWR77566.1 247 VHNLSEKRRRSRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 293 6***********************7.....5****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MDGILYTKFW SGDAAPGPRE LTGQLDHRRG TPPDPLCEEN SSFSSSSSSV VSFFFFNMAE 60 TNDRPTRSHE ADADDMSLLL HHLLSSSSTP NPISPDKGKV PFHLPSPSQT SDAALAIAAR 120 RAVGLNPGWD IFCHVKTPFA DDDRSRPSQL HLSDRDRTTS TEESSAAPLF RPYSAGEMKD 180 GRRSNFVDSS DYCDAASGKR RKAASSSVEA DFDEYECESE EGVEASEDPS RAAPARSASK 240 RSRAAEVHNL SEKRRRSRIN EKMKALQNLI PNSNKTDKAS MLDEAIEYLK QLQLQVQMLS 300 MRNGLSLHPM YLPASLQPIE IPQMSMGFGA GNGSLHMNMG MSMLSMKEDP TTQASFGLSN 360 QSIPSTQTQP PLMPGLTNMN TNSETFSDVT QGHHGSFHLS AASGETYRED VLPQEVDVNH 420 SLKYPLGGPS N

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MDGILYTKFW SGDAAPGPRE LTGQLDHRRG TPPDPLCEEN SSFSSSSSSV VSFFFFNMAE  60
TNDRPTRSHE ADADDMSLLL HHLLSSSSTP NPISPDKGKV PFHLPSPSQT SDAALAIAAR  120
RAVGLNPGWD IFCHVKTPFA DDDRSRPSQL HLSDRDRTTS TEESSAAPLF RPYSAGEMKD  180
GRRSNFVDSS DYCDAASGKR RKAASSSVEA DFDEYECESE EGVEASEDPS RAAPARSASK  240
RSRAAEVHNL SEKRRRSRIN EKMKALQNLI PNSNKTDKAS MLDEAIEYLK QLQLQVQMLS  300
MRNGLSLHPM YLPASLQPIE IPQMSMGFGA GNGSLHMNMG MSMLSMKEDP TTQASFGLSN  360
QSIPSTQTQP PLMPGLTNMN TNSETFSDVT QGHHGSFHLS AASGETYRED VLPQEVDVNH  420
SLKYPLGGPS N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36930.1	1e-36	bHLH family protein