PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR77578.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WOX

Protein Properties

Length: 242aa MW: 27163.6 Da PI: 8.4899

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR77578.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	67.4	1.8e-21	96	155	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eq+ +Le l++ r+p+a+++e+++++l +++ ++V++WFqN++a+e++ RWR77578.1 96 TRWNPTQEQIGILEMLYRGgMRTPNAQQIEQITAQLgkygKIEGKNVFYWFQNHKARERQ 155 7***************99************************************97 PP
2	Wus_type_Homeobox	117.4	6.4e-38	96	157	4	65
Wus_type_Homeobox 4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 tRW+Pt+eQi iLe+ly+ G+rtPn+++i++ita+L +yGkie+kNVfyWFQN+kaRerq+q RWR77578.1 96 TRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQRQ 157 8***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 242 aa Download sequence
MQNPHAPQCP HTIACSPPRV KAMKVHQLTR GFWEHEPSLS LSCKRLRPLA PKLANSDCAT 60 ALDLKSFIKP ESGPRNAGSN DDKRDLPQAE AHSGGTRWNP TQEQIGILEM LYRGGMRTPN 120 AQQIEQITAQ LGKYGKIEGK NVFYWFQNHK ARERQRQKRN GISLNGSPRG ALASPTSSAA 180 NVDVEFGKEE DSYCKRKCRS WGIQRVEEEI GLCGGFRIMG GEEEEEEENK TLELFPLHPE 240 GR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	154	159	RQRQKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46480.1	9e-74	WOX family protein