PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR77651.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 398aa MW: 44448.5 Da PI: 5.4121

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR77651.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60	5.1e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+eEd +++ +v+++G+g+W++I+++ g++R++k+c++rw +yl RWR77651.1 14 RGLWTEEEDTKILAYVAKHGPGNWTSIPKKAGLKRCGKSCRLRWTNYL 61 788*******************************************97 PP
2	Myb_DNA-binding	44.6	3.4e-14	69	110	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++T+eE++ ++ +++ G++ W+ Ia+ ++ gRt++++k++w++ RWR77651.1 69 SFTQEEEQMIITLHATIGSR-WAHIAAQLP-GRTDNDVKNYWNT 110 79****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MGRPPCCDKS NVKRGLWTEE EDTKILAYVA KHGPGNWTSI PKKAGLKRCG KSCRLRWTNY 60 LRPDLRHESF TQEEEQMIIT LHATIGSRWA HIAAQLPGRT DNDVKNYWNT KLRKKLFEMG 120 IDHVTHKPIS QIIADYESIG LPRVNTPSTS KIDPSRSQTS NITRISCLNR DLRKAFMPTP 180 PPSQSLISNF SLSTSMTTEM LPTQDSLLNN QYPTWDLLAQ IQAIKLVADA SNSCNNQETL 240 QPQYFSIEGS SPSSSSSSSS SIRSHQHSIQ TAAYLPLPSQ PYQAQSQDTP SPSSFNWSEY 300 LSEDAFQQDS SSNQMQDDMF SPIPKLDFIG GEKNQYCNGF ADVDGCAQVV HGYSNNMMGG 360 GDSTDILGAD SGNSFVESIL DRDSEMRLWE FPDILDDP

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MGRPPCCDKS NVKRGLWTEE EDTKILAYVA KHGPGNWTSI PKKAGLKRCG KSCRLRWTNY  60
LRPDLRHESF TQEEEQMIIT LHATIGSRWA HIAAQLPGRT DNDVKNYWNT KLRKKLFEMG  120
IDHVTHKPIS QIIADYESIG LPRVNTPSTS KIDPSRSQTS NITRISCLNR DLRKAFMPTP  180
PPSQSLISNF SLSTSMTTEM LPTQDSLLNN QYPTWDLLAQ IQAIKLVADA SNSCNNQETL  240
QPQYFSIEGS SPSSSSSSSS SIRSHQHSIQ TAAYLPLPSQ PYQAQSQDTP SPSSFNWSEY  300
LSEDAFQQDS SSNQMQDDMF SPIPKLDFIG GEKNQYCNGF ADVDGCAQVV HGYSNNMMGG  360
GDSTDILGAD SGNSFVESIL DRDSEMRLWE FPDILDDP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G28470.1	2e-72	MYB family protein