PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR77693.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 259aa MW: 29096.8 Da PI: 7.0188

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR77693.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.2	1.6e-17	30	77	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEdell +++++ G g+W+t +++ g+ R++k+c++rw +yl RWR77693.1 30 RGPWTPEEDELLSNYINKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYL 77 89****************************99**********97 PP
2	Myb_DNA-binding	47.4	4.3e-15	88	128	6	48
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l RWR77693.1 88 PDEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 128 89*************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 259 aa Download sequence
MRNPSKTASG SSGMGSSKTT PCCSKVGLKR GPWTPEEDEL LSNYINKEGE GRWRTLPKRA 60 GLLRCGKSCR LRWMNYLRPS VKRGQIAPDE EDLILRLHRL LGNRWSLIAG RIPGRTDNEI 120 KNYWNTHLSK KLISQGIDPR THKPLNPNPN SYAPEPGHNP LTLTLTLTLI FLGLHNGNED 180 GDMDYCTDDV FSSFLNSLIN EEMFLQQQQQ QNLVAPSDSL ISPMPDFSYG TMWDPAVLSP 240 AVAANEDDSV RFADDVEQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	2e-85	MYB family protein