PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR77750.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NF-YA
Protein Properties Length: 253aa    MW: 27178.6 Da    PI: 9.4663
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR77750.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA104.87.6e-33167223158
   CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 +ep+YVNaKQy++Il+RRq+Rak+e ekkl +k rkpylheSRh+hA+rR+Rg gGrF
  RWR77750.1 167 EEPVYVNAKQYHGILRRRQSRAKAELEKKL-IKVRKPYLHESRHQHAMRRARGDGGRF 223
                 69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MPSRPKNASS IEPKVAGSSP ATTCSQPWWH GSGYTTVSPA VLSQSLLKSP SLEIPNGGAA  60
TKASSSQADV DMDNGAAVSK DIQSSAAQSD GNHAQEQQVH HATSKMPPIM AEYIAPHTQL  120
ELGHTVACAS YPYSDPYGIM TAYGTQPLVH PHILGMHRMA LPLEMTEEPV YVNAKQYHGI  180
LRRRQSRAKA ELEKKLIKVR KPYLHESRHQ HAMRRARGDG GRFLNTKKPN SGASIPTSEE  240
EAGSGAAAPA QSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.21e-50NF-YA family protein