PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR77761.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB
Protein Properties Length: 337aa    MW: 37817.6 Da    PI: 5.539
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR77761.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding475.8e-152673148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEd++l ++    G g+W+ +ar  g+ R++k+c++rw +yl
       RWR77761.1 26 KGLWSPEEDDRLMQYMLNNGQGCWSEVARNAGLQRCGKSCRLRWINYL 73
                     678*******************************************97 PP
2Myb_DNA-binding52.31.3e-1679122146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg++++eE++l+++++  lG++ W+ Ia++++ gRt++++k++w++
       RWR77761.1  79 RGAFSPEEEDLIIHLHSILGNR-WSQIAARLP-GRTDNEIKNFWNS 122
                      89********************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MRKPDQLVKQ NNNNNNNNNA NNKLRKGLWS PEEDDRLMQY MLNNGQGCWS EVARNAGLQR  60
CGKSCRLRWI NYLRPDLKRG AFSPEEEDLI IHLHSILGNR WSQIAARLPG RTDNEIKNFW  120
NSTVKKRIRN SNSSSSPNHS DSSEPGEVMG ALTSMIHDHD IMSMCIDSSP SSSLSSFQNI  180
NMTNLFNPPQ LHGLDSCYNT SGLGPSYFDM PPCLNQVGLE DGFYGGQGIS EGGGHMSIGG  240
KLYVTPSQSA SLEENALNNI THINSSDNHA NNINHGDNIN NINFNTMPTN STNNNNVQRE  300
NIGEQGNHWE GENLKIREWD FDDLMMQDIS SYPLLDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12870.14e-68MYB family protein