PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR77847.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NAC
Protein Properties Length: 338aa    MW: 38311.5 Da    PI: 6.7841
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR77847.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM172.11.7e-53171441128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 
                 lppGfrFhPtdeel+++yL+ kv + ++     i+evd++++ePw+Lp  +k +e+ewyfFs rd+ky+tg r+nrat++gyWkatgkd+ev+s+ +g+
  RWR77847.1  17 LPPGFRFHPTDEELITFYLASKVFNGTFCG-VEIAEVDLNRCEPWELPDVAKMGEREWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREVYSAsNGA 114
                 79*************************877.45***************8888899**************************************997889 PP

         NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                 l g+kktLvfy grap+gekt+Wvmheyrl
  RWR77847.1 115 LLGMKKTLVFYMGRAPRGEKTKWVMHEYRL 144
                 9***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MLALDEVAWE DTNEQGLPPG FRFHPTDEEL ITFYLASKVF NGTFCGVEIA EVDLNRCEPW  60
ELPDVAKMGE REWYFFSLRD RKYPTGLRTN RATEAGYWKA TGKDREVYSA SNGALLGMKK  120
TLVFYMGRAP RGEKTKWVMH EYRLDGDFSY RHTCKDEWVI CRIFHKIGGE KKNPFLQSNR  180
HFLQQSPPST TSLPPLLESL AETFPQSCMG LQDGKLKSPN PSPIPITFQP FSYPTNPAIL  240
KSLSHQFLLK EPPIFKQCKI ENPLLSFHLQ HPTSNWVDRD HQSQQNHCSL DMCSGVLGLS  300
TTGTAHDMSP SVSFGRAGFQ MLDAPHIGDF GESGPLFP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76420.14e-99NAC family protein