PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR77887.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 327aa    MW: 37064.2 Da    PI: 4.7775
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR77887.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH361.3e-11161204654
                 HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                  ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  RWR77887.1 161 LMAERRRRKRLNDRLSMLRSVVPKiS------KMDRTSILGDTIDYMKEL 204
                 589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MELEEHGFLE ELLGLRREAW ENFSPDMSEF FTHGGCFDSY QENPSLVLPY SSLEGFASSS  60
ETAFDSSMNE VYCPYGDGFS VNEFDLSSKK HDSMPCVIQE DCPSIIEDEN LCLLGDSLHN  120
SEKKCKVELA QETKLPAFDI GNCLGRKNKA KKLNGQPSKN LMAERRRRKR LNDRLSMLRS  180
VVPKISKMDR TSILGDTIDY MKELLDRIKR MKEEIQVGAN QMDLFSIFNE LKSNEILVRN  240
TPKFDVERRN TDTRLEICCA AKPGLLLSTV TTLEALGLEI QQCVISCFND FGMQASCSEE  300
MDQRAILSSE DIKQALFRNA GYGGRCM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1164171ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.11e-85bHLH family protein