PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR77916.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

TALE

Protein Properties

Length: 341aa MW: 38772.7 Da PI: 5.7901

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR77916.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.5	2.6e-09	268	302	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 + +yps++e+ LA+++gL+++q+ +WF N+R ++ RWR77916.1 268 RWPYPSETEKVALAESTGLDQKQINNWFINQRKRH 302 569*****************************885 PP
2	ELK	37.5	5.2e-13	222	243	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+Ll+KYsgyLgsLkqE+s RWR77916.1 222 ELKHHLLKKYSGYLGSLKQELS 243 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence
MEDYSQLVEN ATTRGSFPYG AHAFTPNSSV YGCSSSGSNM QKHPLTMNSL QQQPVECFPS 60 LGVKMEGSSS QQMQGCESPN EVDAIKAKIM AHPQYCNLLE AYMNCQKVGA PPEVMARLTS 120 IGQDFETKWR SAMNGQDATR DPELDQFMEA YCDMLVKYRE ELTRPLQEAM DFMKRVESQL 180 MMLTNGSADE KCGGFGSQEE DQDCSGAEAD LPCIEPHVED NELKHHLLKK YSGYLGSLKQ 240 ELSKKKKKGK LPKDARQKLL NWWELHYRWP YPSETEKVAL AESTGLDQKQ INNWFINQRK 300 RHWRPSEDMQ FVVMDGLHHQ NAAALYMESH YPGDGSYRLG P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	1e-120	TALE family protein