PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR78020.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB_related
Protein Properties Length: 140aa    MW: 15936.6 Da    PI: 4.6916
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR78020.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding574.4e-18648347
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      WT+eE++ l++a++  G++ W+ Ia+ ++ gRt++++k++w++ 
       RWR78020.1  6 TWTEEEEKALIKAHEAVGNK-WTEIAKSIP-GRTENSVKNHWNST 48
                     7*******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    
MQKDSTWTEE EEKALIKAHE AVGNKWTEIA KSIPGRTENS VKNHWNSTKR MQLSKKDQKE  60
AENGSKKSQS SLLEDYIRSK IMGMEQSNES EGKNITEDMI MKSHASGGGE ADVQDYELLF  120
GEHDYEMDIS FLLEWATTST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18770.18e-27MYB family protein