PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR78021.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB_related
Protein Properties Length: 126aa    MW: 14139 Da    PI: 7.9506
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR78021.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.81.2e-184894148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g WT++Edell+ +v+++G ++W++I++++  gR +kqc++rw+++l
       RWR78021.1 48 KGQWTPDEDELLASLVAEHGLKSWSLISKRFI-GRVGKQCRDRWYNHL 94
                     799*****************************.*************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    
MKECASSVPE VGEEDMQGFQ QQTTCSSMAE KGVIPGRRRT PEKYYLIKGQ WTPDEDELLA  60
SLVAEHGLKS WSLISKRFIG RVGKQCRDRW YNHLHPDIKA CFSSPFLPAK GQYMGRGGGE  120
GIDQST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27785.11e-22MYB family protein