PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR78055.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB_related
Protein Properties Length: 299aa    MW: 32581.4 Da    PI: 6.3099
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR78055.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding62.39.7e-201358147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +g+W++eEde l  +vk++G+++W++I++ ++ gR++k+c++rw + 
       RWR78055.1 13 KGPWSPEEDEALQSLVKKHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 58
                     79******************************.***********985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MASSRSSDMD RIKGPWSPEE DEALQSLVKK HGPRNWSLIS KSIPGRSGKS CRLRWCNQLS  60
PEVEHRPFSP DEDDTIIRAH AKFGNKESRS SLSEDDFNAL DAGDRPPHKR SASVGAATFQ  120
NPSSPSGSDI SESSLPHLPL TTVSSSSLYR PVPRSGAVFP PEVSSSSNSE GLQTCLSLSL  180
ALPNPDPCES FNVSRPDSMI SNQLLQHGPA SQMMAQMQHQ NPNADILKDV KSYVTGALYP  240
ESAMAERPSI NFGPEFLGII HEMIRSEVRS YMSEINQGGL CSQSNTAMTP IRIGVGRME
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.15e-56MYB family protein