PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR78107.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB_related
Protein Properties Length: 289aa    MW: 31608.1 Da    PI: 10.3438
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR78107.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding361.6e-11555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT eE+e l  +v ++G g W+tI +          R+  ++k++w++
       RWR78107.1  5 KQKWTSEEEEALRAGVDKHGAGKWRTIQKDPEfghclSARSNIDLKDKWRN 55
                     79***************************99999**999**********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MGAPKQKWTS EEEEALRAGV DKHGAGKWRT IQKDPEFGHC LSARSNIDLK DKWRNMSVSG  60
GGQGSRERAR GGQKTKATAH ATQSKATAPA AQLTGSPKSA TPASLTKDAK PATVTDPSKK  120
SQDGKAAPRY NMMIIQALSE VQDPNGLEIS AICKFIEQRH QVPLNFRRFL SSKLRRLVAQ  180
DKIEKVQNLY KLKDPTFATK TPTPKQKDPP VHRSKLPPTK SEAPAETIGE ASMAAAYKIA  240
DVEAKSFLAS EAIKEFERIS RLAEETDSML QLAKEISEQC ARGVILTMA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17520.15e-65MYB_related family protein