PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR78134.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB_related
Protein Properties Length: 280aa    MW: 30637.3 Da    PI: 8.7226
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR78134.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.11.1e-1487131347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ I++++ ++Rt+ q+ s+ qky
       RWR78134.1  87 PWTEEEHRTFLAGLEKLGKGDWRGISKKFVTTRTATQVASHAQKY 131
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MGRKCSHCGN NGHNSRTCSG YRGSFGGVRL FGVQLDIDSP MKKSFSMDSL STSSSRVSMD  60
ESADKITNGY QSDGLIVRPQ QRKKGVPWTE EEHRTFLAGL EKLGKGDWRG ISKKFVTTRT  120
ATQVASHAQK YFLRQNSFNK KKRRSSLFDM VGSSNTAVLV TDSKPKDPIS SWEFPSLFSG  180
SAYQEIPETN PLIDLNSSEQ ETQLAHQETK YPQEPSGLDL MPLCLSSESS SGCASQPSSA  240
ITEHATIHPP NLELTIAAPR PLDRSQTSTS SLLIGPISVT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1140144KKKRR
2140166KKKRRSSLFDMVGSSNTAVLVTDSKPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.12e-52MYB_related family protein