PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR78282.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 177aa    MW: 19415 Da    PI: 5.0362
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR78282.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.73.3e-19959155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                + y+GVr ++ +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a+++++g
  RWR78282.1  9 PVYRGVRMRS-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDVAALSIKG 59
                68*****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MAGEESKHPV YRGVRMRSWG KWVSEIREPR KKSRIWLGTF PTAEMAARAH DVAALSIKGS  60
SAILNFPHLA TKLPRPATLS RHDVQVAAAK AAAMVELGSS SSAVIPPDEL SEIIELPRLG  120
AGFDSPESPN EFVLDDDSPD KWLSVPSPWM DGDLGPFSEQ MWTSEILVSV ACDWNFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25810.11e-49ERF family protein