PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR78361.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 91aa    MW: 10245.6 Da    PI: 9.782
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR78361.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.95.8e-0621601554
                HHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH 15 riNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                +i + +++L++llP+ +   +  ++s + +L++++++I+sL
  RWR78361.1 21 QIIDLISKLQSLLPEiR-DRRVDRVSASRVLQETCNHIRSL 60
                57789**********76.888899***************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    
MSSRRSRSRQ SGGSAAITDE QIIDLISKLQ SLLPEIRDRR VDRVSASRVL QETCNHIRSL  60
HREVDDLSER LSQLLSTSDT AQAAIIRSLL M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74500.11e-24bHLH family protein