PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR78399.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 255aa    MW: 28107.5 Da    PI: 6.103
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR78399.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH154.6e-053886254
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                +  + erE+  Rd++N+ f eL  +l +      + + Ka+iL  A++ +++L
  RWR78399.1 38 KIHKAEREKLKRDHLNELFLELGHVLEPG----RQNNGKASILGDATRILRDL 86
                567889****************9988884....57888999**9999988876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MVSDLSLPMA AESNVVNENS VSSRSLPNKK NPGKVPKKIH KAEREKLKRD HLNELFLELG  60
HVLEPGRQNN GKASILGDAT RILRDLFAQV ECLRKENVAL VTESHYVTVE KNELKDETVV  120
LGGEIEKLQN ELQQRMRSEA GWCNGLGPVQ SQHANLVSSF PEDRLSDDNA SQPPPVVGPV  180
FVLPFHPEVQ AYQELDTVKA LPSKPTSHVR RPQPRYPTPA DTWPSQLLAH TGETQEAQII  240
SSTSTSNGES GSSSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.25e-37bHLH family protein