PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR78405.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

bHLH

Protein Properties

Length: 92aa MW: 10343.6 Da PI: 8.5288

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR78405.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	22.6	1.9e-07	20	59	15	54
HHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 15 riNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 +i + ++L++llP+ + +s K s + +L+++++YI+sL RWR78405.1 20 QIIDLVSKLQTLLPEiH-NRGSDKASASKVLQETCNYIRSL 59 56677799*****66.89*****************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 92 aa Download sequence
MSSRRSRSRQ SGSSRITDDQ IIDLVSKLQT LLPEIHNRGS DKASASKVLQ ETCNYIRSLH 60 REVEDLSERL SELLNTTDTN SAQAAIIRSL LM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26945.1	1e-36	bHLH family protein