PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR78426.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NF-YB

Protein Properties

Length: 240aa MW: 26857.1 Da PI: 9.1492

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR78426.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	176.6	2.4e-55	56	151	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 req+rflP+anvsrimkk lP+nakisk+aketvqecvsefisf+tseasdkcqrekrktingddllwa+ tlGfedyv plk+yl kyre+egek RWR78426.1 56 REQERFLPVANVSRIMKKSLPGNAKISKEAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMKTLGFEDYVGPLKIYLDKYRETEGEK 151 89********************************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MMYYPSKQLK NEAEPSKHSF QLGLPSMDRR RRCSFSPVSS PPSESETGAV CRGPTREQER 60 FLPVANVSRI MKKSLPGNAK ISKEAKETVQ ECVSEFISFI TSEASDKCQR EKRKTINGDD 120 LLWAMKTLGF EDYVGPLKIY LDKYRETEGE KTSMVRQGGD QSPKEESNFR TTNHDGNPTA 180 SNRDLSGFHG GFYSEISTSL GVGGRVLCYG EKSKMNDFHA GKTDGNGVRN RASHHLGIKW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14540.1	1e-62	NF-YB family protein