PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR78465.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 320aa    MW: 35488.8 Da    PI: 6.6789
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR78465.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.51.9e-19125174255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr+++ +grWvAeIr p++   r+r +lg+f+t eeAa a++ a+ kl+g
  RWR78465.1 125 LYRGVRQRH-WGRWVAEIRLPKS---RTRLWLGTFDTSEEAALAYDSAAFKLRG 174
                 59******9.**********954...4*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MDTAIDHYNN SICSSNNIPF FSELISEQLM EAPEPFINGA SNFPITTNPP SPSLSFATHM  60
NSQVFSSHEH LGLEPLYPIE LNQLNPFQIH QIQAQIQLQQ RQANFLAPRT ASMKQFGVPA  120
KPKKLYRGVR QRHWGRWVAE IRLPKSRTRL WLGTFDTSEE AALAYDSAAF KLRGDSARLN  180
FPHLRHQGDY LGGGFGGNSP LHSSVNAKLE AFCQSSANSQ KQRTCHMVAT GTSKLVSSSG  240
LFPETGVSLP EMGLSSSEDI KVPSSRSGSP LSEKEESADR SSPASDIKFS DLIKPTWDES  300
ESFLLQKFPS FEIDWDAILS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.18e-72ERF family protein