PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR78581.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 250aa    MW: 27407.6 Da    PI: 8.4692
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR78581.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.43.5e-1868117255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +ykGVr ++ +g+Wv+eIr p   ++++r++lg++ t+e Aa+a++aa ++l+g
  RWR78581.1  68 QYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYATPEAAARAYDAALLCLKG 117
                 69****998.**********9...336************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MPFPSSPSRN QRRNRKEVEE RRQHNHPSID QQHMVKNNSR APTTHSSVGV AEQIQSNLSK  60
PKSCKKRQYK GVRMRSWGSW VSEIRAPNQK TRIWLGSYAT PEAAARAYDA ALLCLKGSSA  120
NLNFPITPST HFPNTLMSPK SIQRVAAAAA AAASTNIATT PSSPTPTPPP YSSSSSSPSD  180
ERGEISTPCS ENYSASKAED PPCSVDPWID LGGLLSPKYA DQMLDPCALF APPTMEEWDE  240
EGGVDLWTFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.11e-30ERF family protein