PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR78660.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ZF-HD
Protein Properties Length: 259aa    MW: 28677.6 Da    PI: 8.4812
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR78660.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer98.64.5e-3164121260
  ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                  + vrY+eCl+NhAa++Gg+a+DGCgEfmps geegt +a+kC+AC+CHRnFH++e e e
   RWR78660.1  64 KVVRYRECLRNHAAAMGGNATDGCGEFMPS-GEEGTLEAFKCSACNCHRNFHKKEIEGE 121
                  679**************************9.999********************99865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MDISRHEGDI PMPINSSYGG GHSHGHMIHD PSPHNHIITA SASPISSNGP IIPSILADQE  60
PYKKVVRYRE CLRNHAAAMG GNATDGCGEF MPSGEEGTLE AFKCSACNCH RNFHKKEIEG  120
ESSYDCYYLK GRKVVGQKGV LIAGSEAFGY PPGSLIPRPH PQMIMSYNLG HPSDSDEQED  180
GGVLARPPLM KKRFRTKFTQ EQKEKMMGFA EKVGWKIQKQ EESVVQQFCQ EIGVKRSVLK  240
VWMHNNKHNL AKKGSTAST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02540.13e-70ZF-HD family protein