PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR78698.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 158aa    MW: 17513.8 Da    PI: 4.8301
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR78698.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.51.4e-171665255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +ykGVr++k +g+Wv+eIr p   gk++r +lg++ t+e+Aa a++ a  +l+g
  RWR78698.1 16 KYKGVRRRK-WGKWVSEIRLP---GKQTRLWLGSYATPEGAAVAHDTAVFYLRG 65
                8*****998.**********8...556*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
MSQIDEGCTS NSKQDKYKGV RRRKWGKWVS EIRLPGKQTR LWLGSYATPE GAAVAHDTAV  60
FYLRGPSSMA NLNFPMFVPT FHRADMSPTS IQRAASDAGM AIDAQLVAAK GPENDTKLME  120
GSVFQGPECL DWEERAREVN EGQALDLDIS VDDMEICI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11824KGVRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.14e-40ERF family protein