PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR78726.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

TCP

Protein Properties

Length: 169aa MW: 17842.1 Da PI: 9.2145

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR78726.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	121.3	1.1e-37	35	105	2	72
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssase 72 a++k++++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLlqqa+p+i+++tgt++++a+ RWR78726.1 35 AVRKRPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLQQAEPSIIAATGTGTNPAQP 105 789*************************************************************9999954 PP

Sequence ? help Back to Top
Protein Sequence Length: 169 aa Download sequence
MYNNDPPPPI GALTVTEPLL QLHPSSTTTT STALAVRKRP SKDRHSKVDG RGRRIRMPII 60 CAARVFQLTR ELGHKSDGQT IEWLLQQAEP SIIAATGTGT NPAQPYKSGG SAGLWGLSAR 120 PDLGQLWSFA SNEINVPPAG AGFDLRDVGG GGGNERGGAS LMLEEGLGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08330.1	4e-41	TCP family protein