PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR78869.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 228aa    MW: 25432.2 Da    PI: 10.0873
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR78869.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH482.2e-155197354
                HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                ++h+++E+rRR+riN+ +++Lr+l+P+a     +Kl+Ka+ L ++++++k+L
  RWR78869.1 51 QSHSQAEKRRRERINTHLSTLRRLVPSA-----TKLDKATLLGRVIDHVKEL 97
                79**************************.....9****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MAKFFSSGSL QETHMSHWPM VLPWPPHVST SSCQVGGSET SKEAKALISS QSHSQAEKRR  60
RERINTHLST LRRLVPSATK LDKATLLGRV IDHVKELKRK ALEIGNSFTV PTEMDDVTVE  120
CDRNGALKDR FIIRASLCCD DRPELYTDLI QALHGLKLRT VRADMATLGG RVKNVLILST  180
KVGEEGACLS TLKDSLKEVL GRIVFTDVSS QNTNLSKRQR TMPSFWSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25710.12e-43bHLH family protein